Extract all phenology dates — extract_annotations • junglerhythms

Wrapper around the extract_line_sections() function, to loop over all available annotations and extract the relevant line sections.

extract_annotations(
  data = "./data-raw/jungle_rhythms_annotations.rds",
  plot = FALSE,
  image_path =
    "~/Dropbox/Research_Projects/working/congo_phenology/data/yearly_subsets_jpg/",
  output_path = "/scratch/tmp/",
  internal = TRUE
)

Arguments

data: raw annotation data to process (pre-processed with format_zoo_data())
plot: plot the output to a particular directory
image_path: location of the images used in the project, for visualization only.
output_path: where to store images and generated data
internal: logical, save to disk or not